1. Desheng Zeng, Junqing Lv, Xu Li, Hongtao Liu*. (2024) The Arabidopsis blue-light photoreceptor CRY2 is active in darkness to inhibit root growth, Cell.
2. Yuhan Hao, Zexian Zeng, Minhang Yuan1, Hui Li, Shisong Guo, Yu Yang, Shushu Jiang, Eva Hawara, Jianxu Li, Peng Zhang, Jiawei Wang, Xiufang Xin, Wenbo Ma, Hongtao Liu*. (2024) The blue-light receptor CRY1 serves as a switch to balance photosynthesis and plant defense, Cell Host & Microbe.
3. Yuhan Hao, Zexian Zeng, Xiaolin Zhang, Dixiang Xie, Xu Li, Libang Ma, Muqing Liu and Hongtao Liu*. (2023) Green means go: Green light promotes hypocotyl elongation via Brassinoteroid signaling, Plant Cell, 35（5）：1304-1317 doi: 10.1093/plcell/koad022
4. Zhao Zhiwei, Dent Craig, Liang Huafeng, Lv Junqing, Shang Guandong, Liu Yawen, Feng Fan, Wang Fei, Pang Junhong, Li Xu, Ma Libang, Li Bing, Sureshkumar Sridevi, Wan Jia-Weig, Balasubramanian Sureshkumar, and Liu Hongtao*. (2022) CRY2 interacts with CIS1 to regulate thermosensory flowering via FLM alternative splicing, Nature Communications, Nov 17;13(1):7045. doi: 10.1038/s41467-022-34886-2. 2012
5. Zhenhua Zhang, Chenjie Xu, Shiyu Zhang, Chen Shi, Hong Cheng, Hongtao Liu, Bojian Zhong*（2022） Origin and adaptive evolution of UV RESISTANCE LOCUS 8-mediated signaling during plant terrestrialization. Plant Physiology. 188(1):332-346 doi: 10.1093/plphys/kiab486
6. Li X, Liang T, Liu H*. (2022) How plants coordinate their development in response to light and temperature signals. The Plant Cell. (invited review) 34:955-966.
7. Ma Libang, Li Xu, Zhao Zhiwei, Hao Yuhao, Shang Ruixin, Zeng Desheng, Liu Hongtao*. (2021) Light-Response Bric-A-Brack/Tramtrack/Broad proteins mediate cryptochrome 2 degradation in response to low ambient temperature. The Plant Cell. 33：3610-3620 doi: 10.1093/plcell/koab219
8. Shi C, Liu H*. (2021) How plants protect themselves from ultraviolet-B radiation stress. Plant Physiology. https://doi.org/10.1093/plphys/kiab245 (invited review)
9. Liang T#, Shi C#, Peng Y, Tan H, Xin P, Yang Y, Wang F, Li X, Chu J, Huang J, Yin Y, Liu H*. (2020) Brassinosteroid-Activated BRI1-EMS-SUPPRESSOR 1 Inhibits Flavonoid Biosynthesis and Coordinates Growth and UV-B Stress Responses in Plants. The Plant Cell. DOI: https://doi.org/10.1105/tpc.20.00048
10. Xu Li#, Cuicui Liu#, Zhiwei Zhao, Dingbang Ma, Jinyu Zhang, Yu Yang, Yawen Liu, Hongtao Liu*. (2020) COR27 and COR28 are Novel Regulators of the COP1–HY5 Regulatory Hub and Photomorphogenesis in Arabidopsis. The Plant Cell. DOI: https://doi.org/10.1105/tpc.20.00195
11. Shao K#, Zhang X#, Li X#, Hao Y, Huang X, Ma M, Zhang M, Yu F, Liu H*, Zhang P*. (2020) The oligomeric structures of plant cryptochromes. Nature Structural & Molecular Biology. 27: 472–479
12. Yang Y, Liu H*. (2020) Coordinated shoot and root responses to light signaling in Arabidopsis. Plant Communications, DOI: 10.1016/j.xplc.2020.100026.
13. Yang Y, Zhang L, Chen P, Liang T, Li X, Liu H*. (2020) UVR8 interacts with MYB73/MYB77 in a UV-B-dependent manner, regulating auxin responses and lateral root development. EMBO Journal. doi/10.15252/embj.2019101928
14. Liang T, Yang Y, Liu H*. (2019) Signal Transduction Mediated by the Plant UV-B Photoreceptor UVR8. New Phytologist. DOI: 10.1111/nph.15469
15. Zhang N, Meng Y, Li X, Zhou Y, Ma L, Fu L, Schwarzlander M, Liu H, Xiong Y. (2019) Metabolite-mediated TOR signaling regulates the circadian clock in Arabidopsis. Proc Natl Acad Sci U S A. https://www.pnas.org/content/early/2019/11/27/1913095116
16. Wang F, Yuan Z, Zhao Z, Li C, Zhang X, Liang H, Liu Y, Xu Q, Liu H*. (2019) Tasselseed5 encodes a cytochrome C oxidase that functions in sex determination by affecting jasmonate catabolism in maize. Journal of Integrative Plant Biology. https://doi.org/10.1111/jipb.12826.
17. Wang F#, Gao Y#, Liu Y#, Zhang X, Gu X, Ma D, Zhao Z, Yuan Z, Xue H and Liu H*. (2019) BES1 regulated BEE1 controls photoperiodic flowering downstream of blue light signaling pathway in Arabidopsis New Phytologist. DOI: 10.1111/nph.15866
18. Wang J, Chen S, Jiang N, Li N, Wang X, Li Z, Li X, Liu H, Li L, Yang Y, Ni T, Yu C, Ma J, Zheng B, Ren G*. (2019) Spliceosome disassembly factors ILP1 and NTR1 promote miRNA biogenesis in Arabidopsis thaliana. Nucleic Acids Res. 47(15):7886-7900. doi: 10.1093/nar/gkz526.
19. Tan Y, Yang Y, Zhang A, Fei CF, Gu L, Sun S, Xu W, Wang L, Liu H, Wang YF*. (2019) Three CNGC Family Members, CNGC5, CNGC6, and CNGC9, Are Required for Constitutive Growth of Arabidopsis Root Hairs as Ca2+-Permeable Channels. Plant Communications. https://doi.org/10.1016/j.xplc.2019.100001
20. Liang T, Yang Y, Liu H*. (2018) Signal transduction mediated by the plant UV-B photoreceptor UVR8. New Phytologist. 221(3):1247-1252. doi: 10.1111/nph.15469 (Invited review).
21. Liu Y, Li X, Ma D, Chen Z, Wang JW, Liu H*. (2018) CIB1 and CO interact to mediate CRY2 regulation of flowering. EMBO Reports. 19(10). pii: e45762 DOI: 10.15252/embr.201845762.
22. Liang T, Mei S, Shi C, Yang Y, Peng Y, Ma L, Wang F, Li X, Huang X, Yin Y, Liu H*. (2018) UVR8 interacts with BES1 and BIM1 to regulate transcription and photomorphogenesis in Arabidopsis. Developmental Cell. 44:1-12.
23. Yang Y, Liang T, Zhang L, Shao K, Gu X, Shang R, Shi N, Li X, Zhang P, Liu H*.(2018) UVR8 interacts with WRKY36 to regulate HY5 transcription and hypocotyl elongation in Arabidopsis. Nature Plants. 4:98-107 doi: https://doi.org/10.1038/s41477-017-0099-0.
24. Li X, Cai W, Liu Y, Li H, Fu L, Liu Z, Xu L, Liu H, Xu T, Xiong Y* (2017) Differential TOR activation and cell proliferation in Arabidopsis root and shoot apexes. Proc Natl Acad Sci U S A. 114(10):2765-2770.
25. He R#, Li X#, Zhong M#, Yan J, Ji R, Li X, Wang Q, Wu D, Sun M, Tang J, Lin J, Li H, Liu B, Liu H, Liu X*, Zhao X*, Chentao Lin, A photo-responsive F-box protein FOF2 regulates floral initiation by promoting FLC expression in Arabidopsis. The Plant Journal, 2017, 91, 788-801.
26. Li X#, Ma D#, Lu S#, Hu X, Huang R, Liang T, Xu T, Tobin E, Liu H*. (2016) Blue Light- and Low Temperature-Regulated COR27 and COR28 Play Roles in the Arabidopsis Circadian Clock. The Plant Cell. 28(11):2755-2769.
27. Ma D#, Li X#, Guo Y, Chu J, Fang S, Yan C, Noel J, Liu H*. (2016) Cryptochrome 1 interacts with PIF4 to regulate high temperature-mediated hypocotyl elongation in response to blue light. Proc Natl Acad Sci U S A. 113(1):224-9. doi:10.1073/pnas.1511437113.
28. Li L, Li X, Liu Y, Liu H*. (2016) Flowering responses to light and temperature. Sci China Life Science. doi:10.1007/s11427-015-4910-8.
29. Gao QF, Gu LL, Wang HQ, Fei CF, Fang X, Hussain J, Sun SJ, Dong JY, Liu H, Wang YF*. (2016) Cyclic nucleotide-gated channel 18 is an essential Ca2+ channel in pollen tube tips for pollen tube guidance to ovules in Arabidopsis. Proc Natl Acad Sci U S A. 113(11):3096-101. doi: 10.1073/pnas.1524629113.
30. Zhang TQ, Lian H, Tang H, Dolezal K, Zhou CM, Yu S, Chen JH, Chen Q, Liu H, Ljung K, and Wang JW*. (2015) An intrinsic microRNA timer regulates progressive decline in shoot regenerative capacity in plants. Plant Cell. 27(2):349-60.
31. Tan ST, Dai C, Liu HT, and Xue HW*. (2013) Arabidopsis casein kinase1 proteins CK1.3 and CK1.4 phosphorylate cryptochrome 2 to regulate blue light signaling. Plant Cell. 25: 2618-2632.
32. Liu Y, Li X, Li K, Liu H*, Lin C (2013) Multiple bHLH proteins form heterodimers to mediate CRY2-dependent regulation of flowering-time in Arabidopsis, PLoS Genetics. 9(10): e1003861 (Corresponding author)
33. Liu H*, Wang Q, Liu Y, Zhao X, Lin C* (2013) The Arabidopsis photoreceptors CRY2 and ZTL mediate blue-light regulation of the transcription factor CIB1 by distinct mechanisms. Proc Natl Acad Sci U S A. 43：17582-17587 (Co-corresponding author)
34. Liu H*, GomezG, Lin S, Lin S, Lin C (2012) Optogenetic control of transcription in zebrafish. PLoS One. 2012;7(11):e50738. doi: 10.1371/journal.pone.0050738. Epub 2012 Nov 30
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36. Li X, Wang Q, Yu X, Liu H, Yang H et al (2011) Arabidopsis cryptochrome 2 (CRY2) functions by the photoactivation mechanism distinct from the tryptophan (trp) triad-dependent photoreduction. Proc Natl Acad Sci U S A. 108(51):20844-20849.
37. Liu H, Liu B. Zhao C, Pepper M and Lin C (2011). The action mechanisms of plant cryptochromes, Trends in Plant Sciences,16:684-691.
38. Lu S*, Liu H*, Knowles S, Li J, Ma L, Tobin E, Lin C. (2011). A role for protein kinase CK2 alpha subunits in the Arabidopsis circadian clock. (co-first author) Plant Physiology. 157: 1537-1545
39. Zuo Z#, Liu H#, Liu B#, Liu X, Lin C.(2011) Blue Light-Dependent Interaction of CRY2 with SPA1 Regulates COP1 activity and Floral Initiation in Arabidopsis. (co-first author) Current Biology. 21:841-847.
40. Liu B, Zuo Z, Liu H, Lin C. (2011). Arabidopsis cryptochrome 1 interacts with SPA1 to suppress COP1 activity in response to blue light. Gene & Development. 25:1004-1009.
41. Liu B, Liu H, Zhong D, and Lin C. (2010). Searching for a photocycle of the Cryptochrome photoreceptors. Current Opinion in Plant Biology. 13:1-9.
42. Liu H, Yu X, Li K, Klejnot J, Yang H, Lisiero D, Lin C. (2008). Photoexcited CRY2 interacts with CIB1 to regulate transcription and floral initiation in Arabidopsis. Science. 322:1535-1539.
43. Liu HT, Gao F, Li GL, Han JL, Liu DL, Sun DY, Zhou RG. (2008). The calmodulin-binding protein kinase 3 is part of heat-shock signal transduction in Arabidopsis thaliana. The Plant Journal. 55(5):760-73.
44. Liu HT, Li GL, Chang H, Sun DY, Zhou RG, Li B. (2007). Calmodulin-binding protein phosphatase PP7 is involved in thermotolerance in Arabidopsis. Plant Cell & Enviroment. 30(2):156-64.
45. Liu HT, Gao F, Sun DY, Zhou RG. (2006). Primary evidence for involvement of IP3 in heat-shock signal transduction in Arabidopsis. Cell Research. 16(4):394-400.
46. Liu HT, Sun DY, Zhou RG. (2005). Ca2+ and AtCaM3 are Involved in the Expression of Heat Shock Protein Gene in Arabidopsis. Plant Cell & Environment. 28:1276-1284.
47. Li B, Liu HT，Sun DY, Zhou RG. (2004). Ca2+ and Calmodulin modulate DNA-binding activity of maize heat shock transcription factor in vitro. Plant Cell Physiology. 45(5): 627-634.
48. Liu HT，Li B, Shang ZL, Mu RL Sun DY, Zhou RG. (2003). Calmodulin is involved in heat shock signal transduction in wheat. Plant Physiology. 132(7): 1186-1195.